To minimize or upper-bound the value of a function “robustly”, we might instead minimize or upper-bound the “epsilon-robust regularization”, defined as the map from a point to the maximum value of the function within an epsilon-radius. This regularization may be easy to compute: convex quadratics lead to semidefinite-representable regularizations, for example, and the spectral radius … Read more
This work addresses the computation of free-energy di fferences between protein conformations by using morphing (i.e., transformation) of a source conformation into a target conformation. To enhance the morph- ing procedure, we employ permutations of atoms; we transform atom n in the source conformation into atom \sigma(n) in the target conformation rather than directly transforming atom … Read more
PSwarm was developed originally for the global optimization of functions without derivatives and where the variables are within upper and lower bounds. The underlying algorithm used is a pattern search method, more specifically a coordinate search method, which guarantees convergence to stationary points from arbitrary starting points. In the (optional) search step of coordinate search, … Read more
In this paper we consider several facility location problems with applications to cost and social welfare optimization, when the area map is encoded as a binary (0,1) mxn matrix. We present algorithmic solutions for all the problems. Some cases are too particular to be used in practical situations, but they are at least a starting … Read more
In this paper we develop several polynomial-time interior-point methods (IPM) for solving nonlinear primal-dual conic optimization problem. We assume that the barriers for the primal and the dual cone are not conjugate. This broken symmetry does not allow to apply the standard primal-dual IPM. However, we show that in this situation it is also possible … Read more
We propose novel necessary and sufficient conditions for a sensing matrix to be “s-good” — to allow for exact L1-recovery of sparse signals with s nonzero entries when no measurement noise is present. Then we express the error bounds for imperfect L1-recovery (nonzero measurement noise, nearly s-sparse signal, near-optimal solution of the optimization problem yielding … Read more
The scope of this dissertation addresses numerical and theoretical issues in the impulsive control of hybrid finite-dimensional Lagrangian systems. In order to treat these aspects, a modeling framework is presented based on the measure-differential inclusion representation of the Lagrangian dynamics. The main advantage of this representation is that it enables the incorporation of set-valued force … Read more
In this paper, we study a gradient based method for general cone programming (CP) problems. In particular, we first consider four natural primal-dual convex smooth minimization reformulations for them, and then discuss a variant of Nesterov’s smooth (VNS) method recently proposed by Tseng [30] for solving these reformulations. The associated worst-case major arithmetic operations costs … Read more
The integrated refinery-planning (IRP), an instrumental problem in the petroleum industry, is made of several subsystems, each of them involving a large number of decisions. Despite the complexity of the overall planning problem, this work presents a mathematical model of the refinery operations char acterized by complete horizontal integration of subsystems from crude oil purchase … Read more
We propose the DISCO algorithm for graph realization in $\real^d$, given sparse and noisy short-range inter-vertex distances as inputs. Our divide-and-conquer algorithm works as follows. When a group has a sufficiently small number of vertices, the basis step is to form a graph realization by solving a semidefinite program. The recursive step is to break … Read more