In facility layout problems, a major concern is the optimal design or remodeling of the facilities of an organization. The decision-maker’s objective is to arrange the facility in an optimal way, so that the interaction among functions (i.e. machines, inventories, persons) and places (i.e. offices, work locations, depots) is efficient. A simple pure-binary LP model … Read more
We present large-scale optimization techniques to model the energy function that underlies the folding process of proteins. Linear Programming is used to identify parameters in the energy function model, the objective being that the model predict the structure of known proteins correctly. Such trained functions can then be used either for {\em ab-initio} prediction or … Read more
The goal of this paper is to develop some computational experience and test the practical relevance of the theory of condition numbers C(d) for linear optimization, as applied to problem instances that one might encounter in practice. We used the NETLIB suite of linear optimization problems as a test bed for condition number computation and … Read more
Primal-dual interior-point methods (IPMs) have shown their power in solving large classes of optimization problems. However, at present there is still a gap between the practical behavior of these algorithms and their theoretical worst-case complexity results, with respect to the strategies of updating the duality gap parameter in the algorithm. The so-called small-update IPMs enjoy … Read more
This article considers continuous trajectories of the vector fields induced by two different primal-dual potential-reduction algorithms for solving linear programming problems. For both algorithms, it is shown that the associated continuous trajectories include the central path and the duality gap converges to zero along all these trajectories. For the algorithm of Kojima, Mizuno, and Yoshise, … Read more
This software package is a MATLAB implementation of infeasible path-following algorithms for solving conic programming problems whose constraint cone is a product of semidefinite cones, second-order cones, and/or nonnegative orthants. It employs a predictor-corrector primal-dual path-following method, with either the HKM or the NT search direction. The basic code is written in Matlab, but key … Read more
Interior point methods, the traditional methods for the $SDP$, are fairly limited in the sizes of problems they can handle. This paper deals with an $LP$ approach to overcome some of these shortcomings. We begin with a semi-infinite linear programming formulation of the $SDP$ and discuss the issue of its discretization in some detail. We … Read more
The central path in linear optimization always converges to the analytic center of the optimal set. This result was extended to semidefinite programming by Goldfarb and Scheinberg (SIAM J. Optim. 8: 871-886, 1998). In this paper we show that this latter result is not correct in the absence of strict complementarity. We provide a counterexample, … Read more
Until recently, the study of interior point methods has dominated algorithmic research in semidefinite programming (SDP). From a theoretical point of view, these interior point methods offer everything one can hope for; they apply to all SDP’s, exploit second order information and offer polynomial time complexity. Still for practical applications with many constraints $k$, the … Read more
We study and compare preconditioners available for network interior point methods. We derive upper bounds for the condition number of the preconditioned matrices used in the solution of systems of linear equations defining the algorithm search directions. The preconditioners are tested using PDNET, a state-of-the-art interior point code for the minimum cost network flow problem. … Read more